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Re: FamilyTreeDNA provides Y-DNA haplogroups from Family Finder autosomal tests

 

Hi Ed,

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The simple answer is that, unless they're in one of the matches lists of a kit you have access to, you can't. The same applies to admins too, although obviously we have more kits we can see.

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These days there are clearer recommendations of groups to join for new and upgrading testers, and we are seeing people join the project as a result of these upgrades. So, as a project, we can make these kinds of recommendations if testers pro-actively join up as members. For more global requests to people we can't directly contact, we can engage as a group with FTDNA - we've done this in the past, but this is the tactical nuclear option, so it's probably something to be considered once the analysis is complete and we know exactly what we're dealing with.

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Do remember though, that we can expect that a quarter of these testers are already dead and the remainder may not be sufficiently interested in Y-DNA to bother upgrading. The fraction who might upgrade will be much less than from Y-STR testing, for instance. We can't expect the doubling of overall database size over the last six months to equate to a doubling in BigY testing in the future - that will still take many years.

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Cheers,

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Iain.


Re: FamilyTreeDNA provides Y-DNA haplogroups from Family Finder autosomal tests

 

As I posted a couple of days ago on another thread, the branch S3997 has doubled in size according to the Block Tree and the Y haplotree and I can only assume these are folks who have been identified as such through autosomal testing.? My questions is, how can we contact them about taking a YDNA test (preferable Y700) if we can't find out who they are?? Family Finder, like all aDNA tests, only goes back five to six generations at best so most of these folks won't show up as FF matches.

Granted, this may seem like a silly concern.? However, as Iain has pointed out in some of his postings, many of our haplogroups' ancestry is skewed toward Britain - S3997 being one.? But now, with these new testers, there are more from Ireland and one from France; both of which could add to our understanding of the movement of our ancestors.? As I am sure we can all agree, if these folks would take the Y700 test, it would be a benefit to us all.

So, again, how can we find out who these testers are?

Best regards,
Ed Steele


Re: Confirmed haplogroup

 

Hi Jason,

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Good to hear you have your results through. You can find out more about your haplogroup on Discover:

though do be a little critical of the GlobeTrekker output for now - it is still often quite far from the truth.

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Your "terminal" haplogroup, R-FT368395, is between about 1000 and 2000 years old, but probably somewhere in the middle. We can't be more precise than that until we get more data.

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The bad news is that this means that no-one has taken a BigY test who is more closely related to you than that. If that were the case, we would have probably expected to see them on your Y-111 matches anyway. However, we can expect to eventually find new people who are closer to you and provide more accurate dates as time progresses and more people test.

?

Your family is held in high esteem in our little world. Of the handful of tested people within your haplogroup, one is James Watson, one of the discoverers of the DNA double helix. You share a relationship at the age of R-FT368395, so somewhere between 1000 and 2000 years ago - that makes him a distant cousin, but very few people can claim such a close relationship!

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You also share an ancestry from somewhere between 1800 and 2600 years ago with an ancient burial, Cherry Hinton 923, from Cambridgeshire. This is via the older and larger haplogroup R-FGC51269.

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From this slightly larger haplogroup, we can start thinking about ancestral origins. This is a very difficult topic to be precise about and it's fraught with difficulty. A big part of this is because of the biases we have in testing. We can begin with the facts. Within the British Isles, the majority of R-FGC51269 appears to be English. However, there may be large continental populations of the haplogroup that are hidden due to lack of testing. You do have one German in this haplogroup.

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Now the speculation. The combination of a German match, a predominantly English distribution within the UK/Ireland and a haplogroup structure with many of its branches splitting within the period 200-600 AD (indicative of when the population growth happened) makes me think that your ancestors were part of the Germanic communities who migrated to Britain during the Dark Ages: we used to call them "Anglo-Saxons", but the cultural net was probably rather wider than this. This assessment is very much an educated guess, so you should be clear not to treat it as either fact or even a probable conclusion, simply the possibility I think most likely.

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Best wishes,

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Iain.


Re: FamilyTreeDNA provides Y-DNA haplogroups from Family Finder autosomal tests

 

As of last week, by going through various kits and searching Family Finder matches for “FGC11674” and others, I was able to account for the new FGC11674 and FGC11665 tests. I see about ten or more have been added now.

I’ll wait a bit longer and do it again. Then I will reach out to them.


Re: FamilyTreeDNA provides Y-DNA haplogroups from Family Finder autosomal tests

 

I believe it.? I'm being swamped in the R1b All Subclades project.? I continue to send U106 folks your way.? This is has been a little more difficult to sort out they SNPs are being reported at a haplogroup level in a scattered fashion from the Family Finder results.

--
For R1b Y DNA questions please post on one of the two forums:
R1b Y DNA Project Facebook Group -?
R1b All Subclades Project Activity Feed -


Confirmed haplogroup

 

R-FT368395 7 branches lower than I previously knew of

Jason


Re: FamilyTreeDNA provides Y-DNA haplogroups from Family Finder autosomal tests

 

Apparently there's been an update of another nearly 80,000 tests within the last nine days. This suggests that they are working through the FF tests at quite a pace.

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- Iain.


Re: Markers

 

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Ok Thank you, Mike T

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Sent from for Windows

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From: Timothy May
Sent: Tuesday, May 21, 2024 12:14 AM
To: [email protected]
Subject: Re: [R1b-U106] Markers

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Hi Mike,

In this thread we are responding to a different Mike who has a question that involves the comparison of Y-STR Markers of two different testers.

Tim

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Re: No call vs. null

 

Very interesting!? Thanks for sharing, Joe.

On Wednesday, May 22, 2024 at 11:35:40 AM EDT, Joe Fox <jmfoxiii@...> wrote:


"A good example of this is the large group R-L1, which forms about 2% of R-U106 and has a null return on DYS439. Using YBrowse.org, you can see that DYS439 covers positions 12403364..12403611 and that the L1 mutation falls right in the middle of this at 12403455: this mutation causes the STR test to fail."? Iain
?
Leo Little, Neal Fox and I? pursued this? DYS439 issue back in the early 2,000's.? The issue was that the primer used by the Arizona Lab for DYS439 failed because of a mutation in the flank of the marker.? FTDNA identified this marker in 2004 and called it L1. Jim Wilson of Ethnoancestry found the same SNP in my sample and called it S26.? As a result we were able to identify men in Haplogroup R-L1/S26 and start a Haplogroup Project.? FTDNA now uses a different primer and can read DYS439 correctly.
Joe Fox
_._,_._,_


Re: No call vs. null

 

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"A good example of this is the large group R-L1, which forms about 2% of R-U106 and has a null return on DYS439. Using YBrowse.org, you can see that DYS439 covers positions 12403364..12403611 and that the L1 mutation falls right in the middle of this at 12403455: this mutation causes the STR test to fail."? Iain
?
Leo Little, Neal Fox and I? pursued this? DYS439 issue back in the early 2,000's.? The issue was that the primer used by the Arizona Lab for DYS439 failed because of a mutation in the flank of the marker.? FTDNA identified this marker in 2004 and called it L1. Jim Wilson of Ethnoancestry found the same SNP in my sample and called it S26.? As a result we were able to identify men in Haplogroup R-L1/S26 and start a Haplogroup Project.? FTDNA now uses a different primer and can read DYS439 correctly.
Joe Fox


Re: No call vs. null

 

Thank you so much, Iain - I appreciate your detailed explanation.

Mary

On Wednesday, May 22, 2024 at 05:13:39 AM EDT, Iain via groups.io <gubbins@...> wrote:


Hi Mary,

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What this statement means in practice is that that particular STR has failed to produce a test result. For that reason, we wouldn't know if the STR has disappeared, or if the primer has failed because of a mutation in or near the STR.

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To discover what has happened, you need a different form of testing technology. A BigY test will fully sequence shorter STRs, though not many of the longer ones in the standard first 111 that get separately tested by FTDNA. This can be used to identify which of these cases is true.

?

A good example of this is the large group R-L1, which forms about 2% of R-U106 and has a null return on DYS439. Using YBrowse.org, you can see that DYS439 covers positions 12403364..12403611 and that the L1 mutation falls right in the middle of this at 12403455: this mutation causes the STR test to fail.

?

Whether this knowledge is helpful to the end user or not is debateable and depends on the STR. In either case, it represents a single mutation that has occurred in the DNA strand. Unless the STR length can be recovered by other means (the 247 base pairs of the reference DYS439 is much longer than BigY's 100 base pair read length) then any STR length mutations may not be picked up.

?

However, there are cases where STR deletions can identify more serious consequences. The best known of these is DYS464 deletion, which is linked to infertility, since removing all four copies of DYS464 normally necessitates a massive change to the palindromic arms of the Y chromosome, where many of the Y-chromosome's few functioning genes are located. Indeed, it's expected that the reason that multiple copies of DYS464 exist is because the Y chromosome evolved these duplications because it preserves extra copies of these few vital genes, and actions like recLOHs protect them against corruption and deletion.

?

Equally, you can also have multiple STRs deleted without consequence. Randall Prouse (a fellow R-U106er) has set up the Multiple Deletion Project at FTDNA to look at these. His own line has had several million base pairs taken out of the Yp arm, and this has been transmitted without consequence for about 1000 years.

?


Re: No call vs. null

 

Hi Mary,

?

What this statement means in practice is that that particular STR has failed to produce a test result. For that reason, we wouldn't know if the STR has disappeared, or if the primer has failed because of a mutation in or near the STR.

?

To discover what has happened, you need a different form of testing technology. A BigY test will fully sequence shorter STRs, though not many of the longer ones in the standard first 111 that get separately tested by FTDNA. This can be used to identify which of these cases is true.

?

A good example of this is the large group R-L1, which forms about 2% of R-U106 and has a null return on DYS439. Using YBrowse.org, you can see that DYS439 covers positions 12403364..12403611 and that the L1 mutation falls right in the middle of this at 12403455: this mutation causes the STR test to fail.

?

Whether this knowledge is helpful to the end user or not is debateable and depends on the STR. In either case, it represents a single mutation that has occurred in the DNA strand. Unless the STR length can be recovered by other means (the 247 base pairs of the reference DYS439 is much longer than BigY's 100 base pair read length) then any STR length mutations may not be picked up.

?

However, there are cases where STR deletions can identify more serious consequences. The best known of these is DYS464 deletion, which is linked to infertility, since removing all four copies of DYS464 normally necessitates a massive change to the palindromic arms of the Y chromosome, where many of the Y-chromosome's few functioning genes are located. Indeed, it's expected that the reason that multiple copies of DYS464 exist is because the Y chromosome evolved these duplications because it preserves extra copies of these few vital genes, and actions like recLOHs protect them against corruption and deletion.

?

Equally, you can also have multiple STRs deleted without consequence. Randall Prouse (a fellow R-U106er) has set up the Multiple Deletion Project at FTDNA to look at these. His own line has had several million base pairs taken out of the Yp arm, and this has been transmitted without consequence for about 1000 years.

?

Best wishes,

?

Iain.


No call vs. null

 

Hi, all!

An FTDNA Help Center article states "?When an STR simply does not exist in an individual, this is called a null value. When a marker is missing, the value is listed as 0."? It further states that a null value for one tester versus a value for another would be considered a genetic distance of 1.? To my understanding though, no calls are not considered a differing mutation/genetic distance.

My question is this - is FamilyTreeDNA able to distinguish between a null value and a no call for purposes of determining the overall genetic distance between two testers????When they don't get a "read" on a marker, are they able to tell whether it's a no call versus missing marker?

Thank you!

Mary



New Additions to the Block Tree

 

Good morning, all!

Are the testers whose haplogroups were recently identified using Family Finder now being added to the YDNA Haplotree and to the Block Tree? I'm asking because there are many more members reflected for haplogroup R-S3997 than in the past, plus countries not previously represented (i.e., France). It was really surprising to see the numbers jump, yet nothing has changed in my STR or SNP matches.

Ed


Re: Markers

 

Hi Mike,

In this thread we are responding to a different Mike who has a question that involves the comparison of Y-STR Markers of two different testers.

Tim


Re: Markers

 

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Thank you for the information you selected for me. You may have me mixed up with somebody else. If you don’t, can you tell me why this information is being delivered to me?

Thank you for your consideration.

Mike

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?

Sent from for Windows

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From: Iain via groups.io
Sent: Sunday, May 19, 2024 4:22 AM
To: [email protected]
Subject: Re: [R1b-U106] Markers

?

Hi Mike,

?

As others have pointed out, these individuals are related many thousands of years ago.

?

If you'd like to get an estimate of how closely two people are related via Y-STRs, you can try this tool:

For your selection, you can simply uncheck the "exists"/"enable" check boxes at the top of the screen for the seven markers that you don't have to compare.

?

Cheers,

?

Iain.

?


Re: Markers

 

Hi Mike,

?

As others have pointed out, these individuals are related many thousands of years ago.

?

If you'd like to get an estimate of how closely two people are related via Y-STRs, you can try this tool:

For your selection, you can simply uncheck the "exists"/"enable" check boxes at the top of the screen for the seven markers that you don't have to compare.

?

Cheers,

?

Iain.


Re: Markers

 

Hi Mike,

There is a 5 step distance if you look just at the first 12 markers. ?There is no relation or there is only common ancestry many thousands of years ago. ?
I do not know if one marker alone is enough to raise a question mark, but I see the difference between 23 and 24 at DYS390 as a sign that they are not related.

Tim


Re: Markers

 

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Unsure what you are asking, What two people are you asking about?

On May 18, 2024, at 3:56?PM, Robert McMillan via groups.io <tensawmac@...> wrote:

?I quit counting at 10 mismatches. Looks distant or unrelated to me.?
Robert McMillan

On May 18, 2024, at 2:03?PM, Michael Primm <mrprimm53@...> wrote:

?

Greetings,

This was copied from a name project on FTDNA. I could only include 30 markers because one of the kits only had 30. I couldn’t compare haplogroups because one of them was R-M269, which doesn’t help. Is it possible to tell if these 2 guys are related?

DYS393 DYS390 DYS19 DYS385 DYS391 DYS385 DYS426 DYS388 DYS439 DYS389i DYS458 DYS459 DYS455 DYS454 DYS447 DYS437 DYS448 DYS449

DYS464 DYS460Y Y-GATA-H4 YCAII DYS456 DYS607 DYS576 DYS570 CDY DYS442 DYS438

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Kit A:? 13 23 14 11 {12-14} 12 12 12 13 13 29 16 {9-10-10} 11 11 24 15 19 30 {15-15-17-17-17-17} 10 10 {19-23} 16 15 18 19 {37-38-39} 12 12

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Kit B: 13 24 15 10 {11-15} 12 12 12 13 13 29 17 {9-10} 11 11 25 15 19 29 {15-15-17-18} 11 11 {19-23} 16 15 17 17 {37-38} 13 12


Thanks,
Mike


Re: Markers

 

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I quit counting at 10 mismatches. Looks distant or unrelated to me.?
Robert McMillan

On May 18, 2024, at 2:03?PM, Michael Primm <mrprimm53@...> wrote:

?

Greetings,

This was copied from a name project on FTDNA. I could only include 30 markers because one of the kits only had 30. I couldn’t compare haplogroups because one of them was R-M269, which doesn’t help. Is it possible to tell if these 2 guys are related?

DYS393 DYS390 DYS19 DYS385 DYS391 DYS385 DYS426 DYS388 DYS439 DYS389i DYS458 DYS459 DYS455 DYS454 DYS447 DYS437 DYS448 DYS449

DYS464 DYS460Y Y-GATA-H4 YCAII DYS456 DYS607 DYS576 DYS570 CDY DYS442 DYS438

?

Kit A:? 13 23 14 11 {12-14} 12 12 12 13 13 29 16 {9-10-10} 11 11 24 15 19 30 {15-15-17-17-17-17} 10 10 {19-23} 16 15 18 19 {37-38-39} 12 12

?

Kit B: 13 24 15 10 {11-15} 12 12 12 13 13 29 17 {9-10} 11 11 25 15 19 29 {15-15-17-18} 11 11 {19-23} 16 15 17 17 {37-38} 13 12


Thanks,
Mike