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Re: Family Finder tests entering the Y-DNA haplotree

 

Hi all,

Thanks to the spreadsheet shared by Vince (whom I thank very much for this) on another topic, I was able to search for the Y-SNPs, and the corresponding haplogroups, downstream of R-U106, which could probably be covered by Illumina GSA chips used by FTDNA and MyHeritage. This should give us an idea of what we can expect from these Y-SNPs Family Finder tests.

?

333 Y-SNPs downstream of R-U106 are theoretically covered by the chip used by FTDNA, to which we can add 4 SNPs only covered by that used by MyHeritage (51 Y-SNPs R-U106+ in total). Corresponding average TMRCAs are sometimes very recent, like that of R-S9509 (~1912 CE; 2 new FF tests already added). Also, based on a single tested SNP, it is likely that some of these new testers could split, if they performed a bigY test, theSNP? block from their current Y haplogroup. Unfortunately, not all branches downstream of R-U106 will always benefit from this contribution. A certain number of these FF testers will remain at the level of older haplogroups, even R-U106 (which is already a notable progress), or upstream in case of no call on U106.

?

Below, the list of results (the deltas are calculated between the versions of November 29, which serves as my reference, and December 15, 2023 of the Y-DNA HaploTree):

Haplogroup equiv. SNPs TMRCA (mean) TMRCA 95?% CI SNP RSID Position (hg38) Ancestral Derived FTDNA chip MyHeritage chip delta kits delta bigY
R-Z18 9 2231 BCE [-2870 ; -1675] Z18 rs767290651 12879820 G A True False 209 0
R-Z18 9 2231 BCE [-2870 ; -1675] YSC0000054 rs776179379 17264334 G T True True 209 0
R-Z18 9 2231 BCE [-2870 ; -1675] Z16 #N/D 5718690 A G True False 209 0
R-Z346 2 766 BCE [-1203 ; -388] Z346 rs767566690 15500972 T A True False 145 0
R-U106 2 2939 BCE [-3645 ; -2321] U106 rs16981293 8928037 C T True True 131 0
R-L48 2 2396 BCE [-3033 ; -1840] L48 rs13303755 21450311 G T True True 126 0
R-Z304 1 2118 BCE [-2732 ; -1583] Z304 rs770800052 11931607 C A True True 107 0
R-CTS10893 8 862 BCE [-1328 ; -460] CTS10893 rs775088500 20661466 A G True False 104 -1
R-CTS10893 8 862 BCE [-1328 ; -460] FGC903 rs888386409 8038176 G A True False 104 -1
R-CTS10893 8 862 BCE [-1328 ; -460] FGC924 rs780720364 14878780 G T True False 104 -1
R-Z326 2 1356 BCE [-1881 ; -901] Z326 rs774860428 21827220 C T True True 92 0
R-FGC12307 4 113 BCE [-490 ; 208] FGC12307 rs989494489 8191403 G A True False 82 0
R-S18823 2 1804 BCE [-2422 ; -1272] S18823 rs771384012 14695706 T C True False 80 0
R-S18823 2 1804 BCE [-2422 ; -1272] CTS7658 rs754894464 15482393 G A True False 80 0
R-S9342 4 1496 BCE [-2092 ; -985] FGC15477 rs62617662 19400144 C G True False 80 0
R-CTS2509 1 961 BCE [-1472 ; -523] CTS2509 rs771150106 12212948 A G True False 72 0
R-Z159 5 1776 BCE [-2365 ; -1266] Z159 rs755261433 20596263 G C True False 70 0
R-Z159 5 1776 BCE [-2365 ; -1266] Z350 rs762428619 20747084 T A True False 70 0
R-Z8 13 949 BCE [-1395 ; -560] Z8 rs531734163 20029258 C T True False 65 0
R-Z8 13 949 BCE [-1395 ; -560] Z22 rs762317459 8700889 G A True False 65 0
R-Z8 13 949 BCE [-1395 ; -560] Z24 rs748145901 12634562 A G True False 65 0
R-Z8 13 949 BCE [-1395 ; -560] Z26 rs529224675 17164294 G A True False 65 0
R-S5520 2 2334 BCE [-3044 ; -1723] S5520 rs754136806 16923829 G A True False 62 0
R-Z156 2 2527 BCE [-3195 ; -1945] Z156 rs770355795 13668461 A G True False 62 -1
R-FGC13326 1 1755 BCE [-2365 ; -1230] FGC13326 rs1023392750 20444832 A C True False 58 0
R-Z381 1 2667 BCE [-3336 ; -2081] Z381 rs34001725 7378685 C T True False 58 0
R-S23955 3 971 BCE [-1489 ; -528] S23955 rs922193200 19921948 A G True False 55 0
R-S23955 3 971 BCE [-1489 ; -528] S21728 rs902247810 16956976 G A True False 55 0
R-S4060 4 498 BCE [-940 ; -120] S4060 rs111675371 12918732 C T True False 54 0
R-S5684 6 67 BCE [-476 ; 277] S5684 #N/D 8292522 T C True False 54 0
R-U198 6 1518 BCE [-2062 ; -1046] U198 rs17222279 14727619 G A True True 54 0
R-U198 6 1518 BCE [-2062 ; -1046] S1690 rs113946211 21129693 A C True False 54 0
R-CTS2158 1 742 BCE [-1264 ; -301] CTS2158 rs751704156 12080769 C T True False 53 0
R-FGC3861 10 2120 BCE [-2808 ; -1530] FGC3861 rs755327511 13668114 C T True False 51 0
R-FGC3861 10 2120 BCE [-2808 ; -1530] FGC3865 rs936077787 16302065 C T True False 51 0
R-FGC3861 10 2120 BCE [-2808 ; -1530] Z8052 rs748713403 8543971 C T True False 51 0
R-Z2 1 1756 BCE [-2310 ; -1272] Z2 rs576618112 8015298 C T True False 43 0
R-FGC12346 2 1743 BCE [-2433 ; -1157] FGC12346 rs922833697 19975842 C A True False 42 0
R-S15510 6 1185 BCE [-1788 ; -675] S15510 #N/D 12020389 G A True False 41 0
R-CTS12023 26 687 BCE [-1182 ; -266] CTS12023 rs768634009 21264481 C G True False 40 0
R-CTS7080 2 269 BCE [-700 ; 95] CTS7080 rs776035146 15161450 T G True False 40 0
R-Z341 1 534 BCE [-952 ; -174] Z341 rs776035072 14331173 T C True False 40 0
R-L257 1 1395 BCE [-1950 ; -917] L257 rs949087617 13556148 T C True False 39 0
R-L493 3 116 BCE [-562 ; 256] L493 rs13305913 13688446 T G True True 37 0
R-L493 3 116 BCE [-562 ; 256] L477 rs13304552 2999247 G C True True 37 0
R-S15663 15 158 BCE [-560 ; 184] S15663 #N/D 12108749 C T True False 37 0
R-S15663 15 158 BCE [-560 ; 184] FGC8392 rs946523972 14070534 G A True False 37 0
R-FGC13959 2 2378 BCE [-3263 ; -1635] FGC13959 #N/D 20974767 A C True False 36 0
R-Z372 1 1564 BCE [-2118 ; -1084] Z372 rs771337746 19876329 G A True False 36 0
R-CTS3104 4 2222 BCE [-2982 ; -1575] CTS3104 rs757203268 12554482 G A True False 35 0
R-ZP30 5 102 BCE [-501 ; 236] ZP30 rs1024305626 16563939 G A True False 35 0
R-CTS6353 7 683 BCE [-1253 ; -208] CTS6353 rs761745554 14729367 T G True False 34 0
R-CTS6353 7 683 BCE [-1253 ; -208] CTS1117 rs769411575 7348238 C T True False 34 0
R-L163 4 1648 BCE [-2249 ; -1131] L163 rs35040605 7532237 G A True False 34 0
R-S1688 8 1992 BCE [-2602 ; -1461] S1688 rs111566438 20953587 C A True True 33 0
R-S1688 8 1992 BCE [-2602 ; -1461] S1684 rs112362536 12304111 G A True False 33 0
R-FGC8601 6 328 CE [-16 ; 616] FGC8601 rs901156619 21610228 C A True False 32 0
R-FGC8601 6 328 CE [-16 ; 616] FGC13261 rs1003965475 12328278 C T True False 32 0
R-Z31 1 1593 BCE [-2127 ; -1128] Z31 rs772092434 21643378 T C True False 31 0
R-S15627 2 1286 BCE [-1813 ; -831] S15627 rs747281197 12084739 T C True False 30 0
R-Z30 1 2096 BCE [-2698 ; -1571] Z30 rs62615071 20809506 C G True False 30 0
R-S11739 4 846 BCE [-1369 ; -401] S18043 rs779407181 14140542 C A True False 29 0
R-S25234 6 1602 BCE [-2268 ; -1037] S25234 rs999274249 20994005 G A True False 29 0
R-S25234 6 1602 BCE [-2268 ; -1037] BY12490 #N/D 20107897 G A True False 29 0
R-FGC909 10 223 BCE [-652 ; 139] FGC909 rs901562859 8116098 C A True False 28 0
R-FGC909 10 223 BCE [-652 ; 139] FGC918 #N/D 12100065 C T True False 28 0
R-Z12 2 480 BCE [-912 ; -111] Z12 rs531653799 19319568 A C True False 27 0
R-Z375 7 173 BCE [-550 ; 150] Z375 rs753260269 12424089 C T True False 26 0
R-Z375 7 173 BCE [-550 ; 150] ZP1 rs773242166 15277877 C T True False 26 0
R-FGC15333 2 457 CE [90 ; 759] FGC15334 rs548482895 8567989 G A True False 25 0
R-FGC17298 10 801 BCE [-1335 ; -349] FGC17298 rs1049258515 8551018 T G True False 23 0
R-FGC17298 10 801 BCE [-1335 ; -349] Y6458 #N/D 9140803 A G True False 23 0
R-FGC17304 6 281 BCE [-795 ; 144] FGC17307 rs965403143 17110830 A G True False 23 0
R-S11601 17 1381 BCE [-1987 ; -865] S11601 rs926526332 8662150 G A True False 22 0
R-S11601 17 1381 BCE [-1987 ; -865] S15815 rs936711982 12200203 G T True False 22 0
R-S1812 1 823 BCE [-1309 ; -406] S1812 #N/D 19013936 C T True False 22 0
R-Z155 14 1233 BCE [-1807 ; -744] FGC8505 rs757168216 8437410 A G True False 22 0
R-Z155 14 1233 BCE [-1807 ; -744] L259 rs201495354 12915726 C T True True 22 0
R-A410 2 45 BCE [-459 ; 303] A412 rs755527219 19445810 C A True False 21 0
R-S18890 1 47 BCE [-446 ; 290] S18890 rs750793089 14747282 A G True False 21 0
R-S20321 1 595 BCE [-1052 ; -205] S20321 rs980507490 15755420 T A True False 20 0
R-S3262 3 89 CE [-342 ; 445] FGC17228 rs894554664 19060831 G C True False 20 0
R-A688 5 623 BCE [-1143 ; -185] A688 #N/D 22246782 A G True False 19 0
R-L45 12 430 BCE [-876 ; -51] L45 rs35760092 13004225 T G True True 19 0
R-L45 12 430 BCE [-876 ; -51] L164 rs13305517 13589979 G A True True 19 0
R-L45 12 430 BCE [-876 ; -51] L237 rs13305070 13632762 C A True False 19 0
R-L45 12 430 BCE [-876 ; -51] S1938 rs13305785 15664048 T C True True 19 0
R-S22047 2 1471 BCE [-2109 ; -929] S22047 #N/D 17166483 G T True False 19 0
R-S5245 6 77 CE [-281 ; 381] S5245 rs756394288 14219727 T C True False 19 0
R-S5245 6 77 CE [-281 ; 381] S5235 rs759444860 14101622 A C True False 19 0
R-CTS5601 1 600 BCE [-1048 ; -217] CTS5601 rs770613369 14276056 A C True False 18 0
R-FGC14877 18 165 BCE [-619 ; 215] FGC14881 rs767770870 11883635 T C True False 18 0
R-S1894 4 1574 BCE [-2205 ; -1036] S1894 rs934490300 16098109 C T True False 18 0
R-S1894 4 1574 BCE [-2205 ; -1036] CTS10465 rs963965854 17358211 G A True False 18 0
R-ZP48 3 574 CE [156 ; 908] A683 #N/D 12439404 T C True False 18 0
R-A317 9 293 CE [-94 ; 613] A318 rs1032473250 8995831 C T True False 17 0
R-DF94 1 1026 BCE [-1537 ; -587] DF94 rs111927750 9265890 G T True True 16 0
R-DF96 5 1846 BCE [-2439 ; -1332] DF96 rs752880290 15623928 A G True False 16 0
R-DF96 5 1846 BCE [-2439 ; -1332] S1785 #N/D 12458755 C T True False 16 0
R-S11477 7 279 BCE [-830 ; 172] S11477 rs1047730095 8585713 C T True False 16 0
R-S11477 7 279 BCE [-830 ; 172] FGC13316 #N/D 8888547 G T True False 16 0
R-S6915 6 957 BCE [-1581 ; -437] S6915 rs760878937 12792795 G A True False 16 0
R-S6915 6 957 BCE [-1581 ; -437] PH4355 rs773846220 17112630 C G True False 16 0
R-L46 3 1437 BCE [-2027 ; -932] L46 rs13304625 16965529 A G True True 15 0
R-L46 3 1437 BCE [-2027 ; -932] L525 rs13305950 11932499 G T True True 15 0
R-S11515 5 1300 BCE [-1833 ; -840] S11515 rs938629444 8605068 G A True False 15 0
R-S11515 5 1300 BCE [-1833 ; -840] S11895 rs766067060 8880057 C A True False 15 0
R-S3207 3 990 BCE [-1505 ; -549] S3207 rs776351431 14758858 G C True False 15 0
R-S3251 6 1292 BCE [-1831 ; -829] S3894 rs955403971 20997420 A G True False 15 0
R-S4078 1 827 BCE [-1313 ; -411] S4078 rs112456534 12144408 A G True False 15 0
R-Z344 1 744 BCE [-1221 ; -336] Z344 rs757898850 12074034 T G True False 15 0
R-Z9 3 2169 BCE [-2778 ; -1638] Z9 rs544633994 6920349 C T True False 15 0
R-Z9 3 2169 BCE [-2778 ; -1638] Z28 rs62617663 19538924 T C True True 15 0
R-Z9 3 2169 BCE [-2778 ; -1638] Z348 rs531318236 15653854 G A True False 15 0
R-S6941 3 1271 BCE [-1984 ; -679] S6941 rs1035006704 20758159 G T True False 14 0
R-Z6 2 532 BCE [-986 ; -146] Z6 rs769229033 14136643 A G True False 14 0
R-Z6 2 532 BCE [-986 ; -146] Z352 rs772362346 26360365 A G True False 14 0
R-FGC11662 25 1136 BCE [-1683 ; -668] FGC11662 rs918756266 8305228 G T True False 13 0
R-FGC11662 25 1136 BCE [-1683 ; -668] FGC11687 rs929553891 17060299 A G True False 13 0
R-FGC14823 2 1217 BCE [-1833 ; -697] FGC14823 rs918199808 12864452 T C True False 13 0
R-S21607 17 131 CE [-292 ; 482] A769 #N/D 14445130 A G True False 13 0
R-S21607 17 131 CE [-292 ; 482] A770 #N/D 15187792 C A True False 13 0
R-S3311 1 2432 BCE [-3313 ; -1692] S3311 rs770462594 20913560 A T True False 13 0
R-S19425 1 275 CE [-125 ; 604] S19425 #N/D 15139596 C T True False 11 0
R-BY1282 21 3 BCE [-500 ; 403] BY1282 rs919150607 14586375 G A True False 10 0
R-BY729 12 437 BCE [-933 ; -22] Y14076 rs969188983 16016882 C T True False 10 0
R-FGC14814 9 811 BCE [-1443 ; -288] FGC14830 #N/D 16070504 G A True False 10 0
R-FGC14814 9 811 BCE [-1443 ; -288] FGC14831 #N/D 16448254 C G True False 10 0
R-M323 20 1146 BCE [-1892 ; -532] M323 rs13447377 19705832 C T True True 10 0
R-M323 20 1146 BCE [-1892 ; -532] BY2048 rs986414110 20315237 T C True False 10 0
R-Y67920 1 661 BCE [-1277 ; -153] Y67920 #N/D -13128741 C A True False 10 0
R-Z8175 3 471 BCE [-914 ; -93] Z8175 rs1003360839 11732766 C A True False 10 0
R-DF102 1 298 BCE [-706 ; 51] DF102 rs779807010 18908552 G C True False 9 0
R-FGC17308 1 708 BCE [-1269 ; -238] FGC17308 rs901307042 17288629 G T True False 9 0
R-FGC8590 3 527 BCE [-1002 ; -124] FGC8590 rs977002381 14584455 T C True False 9 0
R-L47 2 2195 BCE [-2833 ; -1641] L47 rs34283263 20016683 G A True True 9 0
R-A295 1 480 BCE [-1039 ; -18] A295 #N/D 2831783 A G True False 8 0
R-BY743 2 994 BCE [-1503 ; -557] BY743 rs959144869 8059043 A G True False 8 0
R-BY743 2 994 BCE [-1503 ; -557] S1819 rs1022149007 20756693 G T True False 8 0
R-CTS7411 1 55 BCE [-601 ; 387] CTS7411 rs752076678 15355898 G T True False 8 0
R-FGC12057 1 179 BCE [-581 ; 162] FGC12057 rs758694527 20377632 G C True False 8 0
R-FGC13324 7 854 BCE [-1477 ; -337] FGC13324 rs944850211 17379809 G A True False 8 0
R-S10415 9 321 CE [-52 ; 631] FGC10294 #N/D 8160205 G A True False 8 0
R-S4037 11 405 BCE [-933 ; 34] FGC13394 rs749614897 15315902 A G True False 8 0
R-A226 5 393 BCE [-898 ; 28] A226 rs1052265861 15892808 A G True False 7 0
R-A226 5 393 BCE [-898 ; 28] A227 #N/D 13505249 C T True False 7 0
R-FGC12305 3 666 BCE [-1129 ; -271] FGC12305 rs1034882880 17439461 C T True False 7 0
R-PF889 3 806 CE [497 ; 1057] PF889 rs572658852 15758445 G A True False 7 0
R-Z154 14 217 CE [-143 ; 518] Z303 rs1019952407 8193646 G T True False 7 0
R-Z154 14 217 CE [-143 ; 518] Z355 rs745798348 12840761 T C True False 7 0
R-BY12505 1 391 CE [65 ; 665] BY12505 #N/D 21404314 T C True False 6 0
R-BY78427 5 491 CE [51 ; 842] F2655 rs922720522 15847313 G T True False 6 0
R-FGC11674 8 1084 CE [894 ; 1242] FGC11674 #N/D 13371021 G A True False 6 0
R-FGC57423 8 575 BCE [-1555 ; 175] FGC57405 rs932656426 -11506634 A G True False 6 0
R-S3997 31 905 CE [505 ; 1213] CTS10571 rs1010415597 17439384 C A True False 6 0
R-S4031 4 1241 BCE [-1795 ; -767] S4031 rs774480420 19718089 T C True False 6 0
R-SK2100 13 101 CE [-753 ; 735] PF4145 #N/D 21625757 C T True False 6 0
R-Y138795 10 2223 BCE [-3285 ; -1358] Y138822 rs774599212 -13540369 C A True False 6 0
R-Z319 5 1040 BCE [-1561 ; -594] Z319 rs758005904 14489420 T A True False 6 0
R-Z319 5 1040 BCE [-1561 ; -594] Z325 rs756914616 20584052 T C True False 6 0
R-FGC19774 27 32 CE [-427 ; 409] FGC4314 #N/D 14498428 G A True False 5 0
R-FGC30527 3 344 BCE [-1012 ; 191] FGC30527 #N/D 15465360 T C True False 5 0
R-S5750 1 1069 CE [857 ; 1245] S5750 #N/D 12772188 C G True False 5 0
R-Z152 7 858 CE [558 ; 1102] Z353 rs759248013 8444153 A G True False 5 0
R-FGC12774 11 1064 CE [845 ; 1244] FGC12774 #N/D 8612927 G A True False 4 0
R-FGC12993 5 306 CE [-58 ; 609] FGC13003 #N/D 21335564 A G True False 4 0
R-FGC8512 1 2448 BCE [-3209 ; -1796] FGC8512 #N/D 10129196 C T True False 4 0
R-FT153218 12 433 CE [-114 ; 859] A91 rs1003098404 2950580 G A True False 4 0
R-JFS0083 7 1026 CE [722 ; 1267] F2240 rs753527656 14584682 C T True False 4 0
R-S15585 10 134 CE [-560 ; 668] F2947 rs987599039 17028020 G C True False 4 0
R-S18951 3 430 BCE [-945 ; -1] S18951 rs202243285 14791328 C A True False 4 0
R-S4004 5 1382 BCE [-2011 ; -849] S4004 rs945320572 19305147 G C True False 4 0
R-Z306 4 2288 BCE [-2926 ; -1732] Z306 rs767031713 20625892 C G True False 4 0
R-Z306 4 2288 BCE [-2926 ; -1732] S1667 rs1014582727 20404882 T G True False 4 0
R-Z378 5 845 BCE [-1328 ; -431] S5741 rs779053993 22268360 A C True False 4 0
R-Z383 2 24 BCE [-534 ; 391] Z383 rs34173183 22259715 C T True True 4 0
R-BY71326 20 1588 CE [1261 ; 1803] S1051 rs772934710 14237224 C T True False 3 0
R-FGC13445 4 1604 BCE [-2289 ; -1025] FGC13476 #N/D 20387961 G T True False 3 0
R-FGC34929 5 259 CE [-348 ; 730] ZS2542 #N/D 17951802 C T True False 3 0
R-L127 14 1279 CE [942 ; 1529] L127 rs17269396 12168275 G A True True 3 0
R-S16818 12 281 CE [-105 ; 601] S21059 rs916804862 16488902 G A True False 3 0
R-S5246 6 885 CE [618 ; 1105] S5246 #N/D 13671150 C T True False 3 0
R-Z331 3 1930 BCE [-2534 ; -1406] Z331 rs777228318 15263224 C T True False 3 0
R-Z331 3 1930 BCE [-2534 ; -1406] Z347 rs748760370 15551788 T A True False 3 0
R-ZP261 19 1576 CE [1398 ; 1710] ZP117 rs745779510 -20645428 G T True False 3 0
R-A764 3 546 CE [159 ; 859] A766 #N/D 9608122 A C True False 2 0
R-BY17482 7 854 CE [-33 ; 1435] F2557 #N/D 15559072 T G True False 2 0
R-BY205963 15 232 BCE [-1150 ; 461] F3547 rs758477101 21636886 C T True False 2 0
R-FGC13446 43 1043 CE [717 ; 1298] FGC13450 rs978482885 10057124 G T True False 2 0
R-FGC13446 43 1043 CE [717 ; 1298] FGC13458 rs775165673 -13908115 T A True False 2 0
R-FGC13446 43 1043 CE [717 ; 1298] FGC13466 rs992502127 15869299 T C True False 2 0
R-FT111760 10 1739 CE [1579 ; 1853] F168 rs72618751 8929737 C T True True 2 0
R-FTA63224 7 178 CE [-580 ; 749] F1673 rs747071402 11907026 C T True False 2 0
R-FTE61364 27 1744 CE [1537 ; 1880] F531 rs72611680 17145972 G A True True 2 2
R-JFS0041 15 186 CE [-188 ; 499] FGC12776 #N/D 13054937 G T True False 2 0
R-L693 44 1666 CE [1483 ; 1798] L693 rs778914553 12580393 G T True False 2 0
R-S22116 7 1170 BCE [-1744 ; -682] S22116 rs768200411 17210054 G T True False 2 0
R-S3542 22 607 CE [37 ; 1039] CTS1293 rs778552105 7449186 G A True True 2 0
R-S3542 22 607 CE [37 ; 1039] CTS3410 #N/D 12792418 T C True False 2 0
R-S6358 8 867 CE [649 ; 1052] FGC14806 rs1018508470 21606889 T C True False 2 0
R-S6924 2 1594 BCE [-2176 ; -1093] S18461 rs751131146 14440931 A G True False 2 0
R-S9355 9 1055 BCE [-1686 ; -528] S11319 #N/D 8480555 T C True False 2 0
R-S9509 19 1912 CE [1784 ; 1985] Y135925 rs375596029 -12491500 C A True False 2 0
R-Z11 4 594 BCE [-1021 ; -227] Z11 rs545113875 14079000 G A True False 2 0
R-A411 6 426 BCE [-881 ; -41] S1791 rs781667247 14178374 T C True False 1 0
R-A415 8 168 BCE [-590 ; 189] A415 rs755942864 21153242 A G True False 1 0
R-A768 2 806 CE [459 ; 1083] A768 #N/D 14113261 T G True False 1 0
R-BY1745 1 1488 CE [1327 ; 1615] BY1745 #N/D 19236408 C A True False 1 0
R-BY19000 16 740 BCE [-1556 ; -91] PAGES00119 rs72625375 19708042 T C True False 1 0
R-BY61305 20 1331 CE [599 ; 1761] F2602 #N/D 15697929 A G True False 1 0
R-CTS3553 9 679 CE [125 ; 1096] CTS3553 rs767407959 12896071 C T True False 1 0
R-FGC12775 1 848 BCE [-1381 ; -397] FGC12775 #N/D 12187664 C G True False 1 0
R-FGC15440 19 1410 CE [1259 ; 1533] FGC15446 #N/D 14837173 G A True False 1 0
R-FGC15440 19 1410 CE [1259 ; 1533] FGC15447 #N/D 15022953 A G True False 1 0
R-FGC15450 8 607 BCE [-1137 ; -163] FGC15441 #N/D 8067444 T C True False 1 0
R-FGC17230 1 307 BCE [-810 ; 112] FGC17230 #N/D 12141111 A G True False 1 0
R-FGC8579 2 296 BCE [-755 ; 90] FGC8579 rs1022686424 8650431 G T True False 1 0
R-FT362693 19 1011 CE [420 ; 1426] BY2096 #N/D 20661787 C T True False 1 1
R-FT61322 5 741 CE [189 ; 1153] AM01817 rs79214009 19140796 G A True True 1 0
R-FT64966 28 1138 CE [704 ; 1455] Y83905 rs779986889 -7456222 C T True False 1 1
R-FTA3154 24 1212 CE [666 ; 1582] M310 rs13447357 20589977 C T True True 1 0
R-FTC96071 36 1696 CE [1459 ; 1853] Z1455 rs776813099 19320725 G A True False 1 0
R-L1 4 1202 BCE [-1740 ; -740] L1 rs750746218 12403455 C T True False 1 0
R-PH2129 17 454 CE [32 ; 794] FGC28482 rs1044594591 16307481 C T True False 1 0
R-S12035 13 29 BCE [-492 ; 353] S12035 #N/D 9002193 C A True False 1 0
R-S27458 11 551 CE [-46 ; 1002] S27458 rs1367254 8121278 G A True True 1 0
R-S3514 16 877 CE [389 ; 1243] CTS10245 rs777887557 17231508 T C True False 1 0
R-S5627 1 459 CE [109 ; 749] S5627 #N/D 8683327 C T True False 1 0
R-S5673 9 246 BCE [-687 ; 125] S5691 #N/D 14325923 A G True False 1 0
R-S8368 9 964 BCE [-1548 ; -473] S8368 #N/D 2960275 G A True False 1 0
R-SK1171 1 1009 CE [618 ; 1307] SK1171 rs1022022813 18995986 C T True False 1 0
R-Y130644 10 1897 CE [1768 ; 1973] Z795 rs577234455 20898208 G A True False 1 0
R-Z1 2 903 BCE [-1354 ; -512] Z1 #N/D 4699590 T C True False 1 0
R-Z7 1 1674 BCE [-2219 ; -1198] Z7 rs556628903 15279680 C T True False 1 0
R-A561 5 1188 CE [918 ; 1401] A561 #N/D 8686270 G A True False 0 0
R-A561 5 1188 CE [918 ; 1401] A562 #N/D 9643996 C G True False 0 0
R-A671 12 1133 CE [749 ; 1419] A695 #N/D 26611563 C A True False 0 0
R-BY1188 10 1087 CE [868 ; 1267] BY1209 #N/D 13703228 C T True False 0 0
R-BY1188 10 1087 CE [868 ; 1267] BY784 #N/D 8405370 C T True False 0 0
R-BY1285 22 1253 CE [999 ; 1452] FGC13398 rs371496556 13479203 C T True False 0 0
R-BY1366 14 779 CE [472 ; 1030] Y14201 #N/D 11925136 A C True False 0 0
R-BY160589 9 316 CE [-333 ; 811] FT459752 rs112197623 -20313517 C T False True 0 0
R-BY160600 33 1695 CE [1484 ; 1839] CTS603 rs755980219 7018926 A G True False 0 0
R-BY16436 8 1015 CE [604 ; 1325] CTS5106 rs778982427 13908139 C T True False 0 0
R-BY18896 7 1342 BCE [-2576 ; -393] F1566 #N/D 9665036 C T True False 0 0
R-BY18987 17 563 CE [-247 ; 1138] Y109628 rs72625360 -20582730 G C True False 0 0
R-BY20800 13 1425 CE [1187 ; 1606] CTS10626 rs774211279 20503049 G C True False 0 0
R-BY35998 17 1746 CE [1550 ; 1876] PAGES00020 rs34948194 19460120 C T True False 0 0
R-BY55709 18 1462 CE [1213 ; 1647] CTS4067 rs746738887 13261762 C T True False 0 0
R-BY56911 9 1369 CE [1049 ; 1602] YP5054 rs368273731 16833893 G A True True 0 0
R-BY61437 23 1022 CE [135 ; 1576] FT178791 rs574960977 -7063100 C A True True 0 0
R-BY64060 6 1796 CE [1601 ; 1920] FGC22112 rs908418371 13686861 G A True False 0 0
R-BY66068 27 1906 CE [1779 ; 1980] BY83023 rs62608681 10182366 T C False True 0 0
R-BY9036 10 1827 CE [1685 ; 1922] BY887 #N/D 9458370 T C True False 0 0
R-BY99947 3 658 CE [-172 ; 1234] FT181607 rs72611674 -16887869 G A True True 0 0
R-CTS1045 32 1919 CE [1822 ; 1979] CTS1045 rs759340890 7301510 C T True False 0 0
R-CTS11070 16 1680 CE [1473 ; 1824] CTS11070 rs750005724 20768355 C T True False 0 0
R-CTS2361 7 1377 CE [1141 ; 1558] S4925 rs757766067 15549080 T C True False 0 0
R-CTS2467 8 845 CE [374 ; 1201] Y179107 #N/D -12297963 C G True False 0 0
R-CTS4077 2 1804 CE [1613 ; 1924] CTS4077 rs113845809 13265922 G A True True 0 0
R-CTS4089 13 1685 CE [1553 ; 1785] Y14063 #N/D 2783314 A G True False 0 0
R-CTS4089 13 1685 CE [1553 ; 1785] Y14211 rs770235851 15778596 G A True False 0 0
R-CTS5578 2 425 CE [-382 ; 1008] CTS5578 rs771450638 14265284 G A True False 0 0
R-CTS6365 1 10 BCE [-1314 ; 883] CTS6365 rs747222512 14739901 T A True False 0 0
R-CTS8536 4 1210 CE [654 ; 1585] CTS8536 rs765552275 15960557 G A True False 0 0
R-F3539 1 1868 CE [1716 ; 1960] F3539 rs775076145 21611041 G A True False 0 0
R-FGC11665 1 632 CE [366 ; 857] FGC11665 rs934780340 9983201 G A True False 0 0
R-FGC11672 17 548 CE [269 ; 783] FGC11663 #N/D 9191107 T G True False 0 0
R-FGC12306 1 922 BCE [-1422 ; -494] FGC12306 rs945060175 19908529 A G True False 0 0
R-FGC12365 16 51 CE [-652 ; 594] L93 rs778046767 3020620 A G True False 0 0
R-FGC13315 7 628 CE [111 ; 1025] P89 rs370317248 12738531 G T True True 0 0
R-FGC13315 7 628 CE [111 ; 1025] PF4142 rs972592106 8967701 T C True False 0 0
R-FGC14840 1 714 BCE [-1452 ; -120] FGC14840 #N/D 21711766 G T True False 0 0
R-FGC15469 1 1622 CE [1449 ; 1751] FGC15469 rs368797174 -9977592 T A True True 0 0
R-FGC17500 11 1067 CE [400 ; 1514] FGC17504 #N/D 11788808 C T True False 0 0
R-FGC18842 1 1232 BCE [-1788 ; -756] FGC18842 rs1051639762 15053731 C A True False 0 0
R-FGC398 3 880 CE [180 ; 1365] L199 rs781777817 13365868 T A False True 0 0
R-FGC48643 2 1846 CE [1681 ; 1948] FGC48643 rs377487780 -19617365 T C True True 0 0
R-FGC8507 23 1708 CE [1540 ; 1828] FGC8518 #N/D 15660997 A G True False 0 0
R-FGC8507 23 1708 CE [1540 ; 1828] FGC8526 #N/D 20907983 T G True False 0 0
R-FGC904 3 1329 BCE [-1864 ; -868] FGC904 rs778322062 20476815 A T True False 0 0
R-FT100970 7 236 BCE [-1201 ; 486] L980 #N/D 3568346 C G True False 0 0
R-FT106563 16 1760 CE [1603 ; 1870] FT107895 rs572758314 14504352 C G True False 0 0
R-FT208024 2 1720 CE [1584 ; 1820] CTS2810 #N/D 12385582 G C True False 0 0
R-FT222422 20 1612 CE [1391 ; 1770] FGC23547 #N/D 16494932 G A True False 0 0
R-FT233425 19 1758 CE [1540 ; 1898] CTS9945 #N/D 17052966 C T True False 0 0
R-FT267000 22 1666 CE [1568 ; 1745] Y151716 rs199962591 -15950482 C T True False 0 0
R-FT2986 15 1916 CE [1798 ; 1984] L972 rs9341273 -13479565 T G True False 0 0
R-FT31133 32 1800 CE [1625 ; 1913] L385 #N/D 3020626 C T True False 0 0
R-FT389155 4 1617 CE [1484 ; 1721] MF54378 rs9785838 -21392875 A G True False 0 0
R-FT421644 41 1870 CE [1713 ; 1963] Z13471 rs561334695 6505111 T C True False 0 0
R-FT423891 2 1642 CE [1348 ; 1833] CTS5108 rs769032586 13908601 C T True False 0 0
R-FTA3588 11 1113 CE [674 ; 1433] FTA3804 rs202110412 -14204383 G T True True 0 0
R-FTA84029 1 1740 CE [1589 ; 1848] FTA84029 rs7067491 -19060982 G T True True 0 0
R-FTA88778 11 1906 CE [1781 ; 1980] CTS1754 rs779214827 11928893 G A True False 0 0
R-FTC6778 8 1787 CE [1583 ; 1916] CTS5887 rs113741650 14424321 T C True False 0 0
R-FTC93298 6 1659 CE [1393 ; 1835] CTS8525 rs373247755 15956277 G A True False 0 0
R-FTD38057 3 1316 CE [989 ; 1557] FTD40359 rs927909663 -17272195 A T True False 0 0
R-JFS0063 18 1711 CE [1535 ; 1835] FGC8472 #N/D 15834816 C T True False 0 0
R-L179 11 1540 CE [1196 ; 1769] L179 #N/D 15670246 G A True False 0 0
R-L188 12 1600 CE [1450 ; 1716] L188 #N/D 19706765 A G True False 0 0
R-L6 21 1227 CE [727 ; 1571] L6 #N/D 12708013 C A True False 0 0
R-M157 14 1587 CE [960 ; 1911] M157 rs374253281 19705968 A C True True 0 0
R-M157 14 1587 CE [960 ; 1911] FGC10296 #N/D 8802850 C A True False 0 0
R-M356 13 1916 CE [1789 ; 1988] M356 rs758698187 3020162 C G True True 0 0
R-PAGES00105 5 204 CE [-1204 ; 1121] PAGES00105 rs72625363 13887385 C G True False 0 0
R-S10807 1 Unknown [Unknown ; Unknown] S10807 rs761394913 8036213 G A True False 0 0
R-S27212 21 1577 CE [949 ; 1905] S27212 rs13303599 7703081 A G True True 0 0
R-S27212 21 1577 CE [949 ; 1905] FT185755 rs13305875 8841301 A G True True 0 0
R-S27212 21 1577 CE [949 ; 1905] FT186642 rs13304566 12676415 G A True True 0 0
R-S27212 21 1577 CE [949 ; 1905] S27225 rs13303752 12808965 C T True True 0 0
R-S27212 21 1577 CE [949 ; 1905] S27331 rs13304779 15130265 T C True True 0 0
R-S27212 21 1577 CE [949 ; 1905] S27653 rs35917709 15804744 C T True True 0 0
R-S27282 20 1833 CE [1679 ; 1932] S27282 rs13304290 13143580 A G True True 0 0
R-S27571 6 1741 CE [1637 ; 1821] S27571 rs3096824 7189754 C T True True 0 0
R-S27657 2 356 CE [-450 ; 944] S27619 rs34760202 14604938 G A True True 0 0
R-Y137023 13 1272 CE [739 ; 1628] CTS6278 rs774746880 14679976 C T True False 0 0
R-Z307 2 2212 BCE [-2839 ; -1665] Z307 rs768320397 16935252 C T True False 0 0
R-Z330 13 1422 BCE [-1957 ; -959] Z330 rs763004705 14474114 A G True False 0 0
R-Z330 13 1422 BCE [-1957 ; -959] Z327 rs767982939 7289009 T C True False 0 0
R-Z330 13 1422 BCE [-1957 ; -959] Z328 rs769206357 7870008 C T True False 0 0
R-Z330 13 1422 BCE [-1957 ; -959] Z329 rs531172941 7924954 T C True False 0 0
R-Z330 13 1422 BCE [-1957 ; -959] Z335 rs533877526 17238025 A T True False 0 0
R-Z330 13 1422 BCE [-1957 ; -959] Z337 rs756921925 19861679 T G True False 0 0
R-Z80 8 458 BCE [-1217 ; 143] Z80 rs758796968 7487796 G A True False 0 0
R-Z80 8 458 BCE [-1217 ; 143] Z81 rs761061684 12152232 G A True False 0 0
R-Z82 24 1567 CE [1173 ; 1816] Z309 #N/D 5461139 G T True False 0 0
R-Z82 24 1567 CE [1173 ; 1816] Z315 rs774697905 -12054677 T A True False 0 0
R-Z82 24 1567 CE [1173 ; 1816] Z322 #N/D 15190984 C T True False 0 0
R-Z82 24 1567 CE [1173 ; 1816] Z323 #N/D 18656180 T C True False 0 0
R-ZP10 2 1365 CE [1158 ; 1529] ZP10 #N/D 15420591 C T True False 0 0
R-ZP141 8 727 BCE [-1440 ; -149] Y18500 rs760134582 -21107999 T A True False 0 0
R-ZP2 6 348 CE [43 ; 607] S5739 #N/D 13476086 A C True False 0 0
R-ZP53 1 1153 CE [905 ; 1351] ZP53 #N/D 15307469 C T True False 0 0
R-ZP61 11 1504 CE [1129 ; 1753] Z251 rs746402982 8868293 G A False True 0 0
R-ZP74 2 1378 CE [1112 ; 1579] ZP74 #N/D 14373337 G A True False 0 0
R-Z160 1 2170 BCE [-2816 ; -1610] Z160 rs867214935 11065980 T C True False -1 0



Note: the positions (hg38) of the SNPs listed are those provided by FTDNA in its December 15, 2023 version of its Y-DNA HaploTree. Some of these positions have a negative value (just like the FTT SNPs from T2T alignments, it seems to me). I don't know exactly what that might mean. Perhaps these are SNPs subject to caution?

Cheers,

Ewenn
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