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YFull says I'm R-Y340824


 

Hi Shane,

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You might want to check YFull again. Currently the R-Y340824 group is empty, but it does show a sample YF131078, which I presume is yours, at R-FGC17465*.

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Since YFull only has a small number of testers compared to Family Tree DNA, not all the haplogroups are represented, and some are represented under different names. R-FGC17465 at YFull is equivalent to R-FGC17460 at YFull, since there are no FGC17465+ FGC17460- testers to form a new haplogroup. Consequently, both of you are placed in R-FGC17465=R-FGC17460, and given a TMRCA of ~2200 years.

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Cheers,

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Iain.
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Hi Iain,

I don't understand the YFull tree for FGC17465. You are correct that neither Bertram nor Myself are shown under Y340824. Yet my HG Variants are shown as FGC17465* and Y340824.
YFull gives a TMRCA of 350 AD for Y340824.

Thanks,
Shane


On Tuesday, September 3, 2024 at 02:15:53 PM CDT, Iain via groups.io <gubbins@...> wrote:


Hi Shane,

?

You might want to check YFull again. Currently the R-Y340824 group is empty, but it does show a sample YF131078, which I presume is yours, at R-FGC17465*.

?

Since YFull only has a small number of testers compared to Family Tree DNA, not all the haplogroups are represented, and some are represented under different names. R-FGC17465 at YFull is equivalent to R-FGC17460 at YFull, since there are no FGC17465+ FGC17460- testers to form a new haplogroup. Consequently, both of you are placed in R-FGC17465=R-FGC17460, and given a TMRCA of ~2200 years.

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Cheers,

?

Iain.
?


 

Hi Shane,

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Ah, now I see the source of your confusion! :)

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If my interpretation is correct, your addition to YFull is new and the tree structure hasn't caught up with your new test. It needs to wait until the next revision of the tree before your branch is fully added.

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We know that you and Bertram share heritage below R-FGC17465, so there should be some SNPs that you share. FTDNA have found several of these, and placed you in the existing haplogroup R-FGC17460, which includes several SNPs besides FGC17460 itself, all with A... FT... or FGC... names.

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My interpretation of what YFull is showing is that they have found a new SNP, Y340824, that exists in both your test and Bertram's test, but not in the two R-FGC17464 tests. If true, this would mean you are more closely related to Bertram, and that you belong to a new haplogroup (R-Y340824) that is more recent than R-FGC17460. However, Family Tree DNA have declined to call this SNP for reasons that are not currently clear. YBrowse shows the SNP at position chrY:16,987,621.

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It's possible for me, as an administrator for the YFull R-U106 group, to go into your test and Bertram's test and look at this SNP in detail. However, it might be best to wait until the YFull tree is properly updated before I do this - their updates aren't as regular as FTDNA's.

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Regarding TMRCAs, those at FTDNA will be considerably more accurate than what is shown at YFull, even if you have do share a SNP that FTDNA doesn't recognise. This is because FTDNA takes a lot more of the Y chromosome into account with the calculation, includes Y-STRs in their calculation and (crucially) has the much larger database of testers on which to base their estimates. So I would stick with the 200 BC +/- 400 years that FTDNA offers for your relationship with Bertram instead.

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Best wishes,

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Iain.


 

An amazing reply by Lain.
Thank You


 

Iain,

Much appreciation for your time on this.

Shane

On Thursday, September 5, 2024 at 02:36:56 AM CDT, Iain via groups.io <gubbins@...> wrote:


Hi Shane,

?

Ah, now I see the source of your confusion! :)

?

If my interpretation is correct, your addition to YFull is new and the tree structure hasn't caught up with your new test. It needs to wait until the next revision of the tree before your branch is fully added.

?

We know that you and Bertram share heritage below R-FGC17465, so there should be some SNPs that you share. FTDNA have found several of these, and placed you in the existing haplogroup R-FGC17460, which includes several SNPs besides FGC17460 itself, all with A... FT... or FGC... names.

?

My interpretation of what YFull is showing is that they have found a new SNP, Y340824, that exists in both your test and Bertram's test, but not in the two R-FGC17464 tests. If true, this would mean you are more closely related to Bertram, and that you belong to a new haplogroup (R-Y340824) that is more recent than R-FGC17460. However, Family Tree DNA have declined to call this SNP for reasons that are not currently clear. YBrowse shows the SNP at position chrY:16,987,621.

?

It's possible for me, as an administrator for the YFull R-U106 group, to go into your test and Bertram's test and look at this SNP in detail. However, it might be best to wait until the YFull tree is properly updated before I do this - their updates aren't as regular as FTDNA's.

?

Regarding TMRCAs, those at FTDNA will be considerably more accurate than what is shown at YFull, even if you have do share a SNP that FTDNA doesn't recognise. This is because FTDNA takes a lot more of the Y chromosome into account with the calculation, includes Y-STRs in their calculation and (crucially) has the much larger database of testers on which to base their estimates. So I would stick with the 200 BC +/- 400 years that FTDNA offers for your relationship with Bertram instead.

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Best wishes,

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Iain.


 

Thank you Iain for this explanation,
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If my understanding is correct, the MRCA of Shane and the 16 mens tested positive for R-BY11544 in FTDNA (including me) would be only a few generation younger than the MRCA of all descendants of R-FGC17460 (R-FGC17465 on Yfull), maybe a son or a grandson.
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Best regards?
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Bertram?


 

Hi Bertram,

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If my interpretation is correct, then your interpretation is correct! There is only one SNP that would separate your common ancestor from the YFull R-FGC17460=R-FGC17465 common ancestor, so they would nominally be about 83 years younger. The actual number depends on the random nature of SNPs, so it could be centuries. If this is structure remains in the next update to YFull's tree, then we can contact FTDNA and see if they will recognise this haplogroup.

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Cheers,

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Iain.


 

Iain,
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Here is an update on the Yfull Y340824 subclade. There is now a Romanian kit that has been placed in Y340824. However, Bertram and I remain in FGC17465* on the Yfull tree. Yet we are still shown as variant hg Y340824 on the first page. Bertram and I were hoping you might have some insight.
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Thanks,
Shane


 

Hi Shane,

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It looks to me like the update at YFull is not complete.

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It's impossible to have a haplogroup with one person. That rather defies the idea of a group! It's certainly not possible to define the common ancestor of one person except as themselves, so to establish a TMRCA for the haplogroup as they have done means something is amiss. That something is having other people in the haplogroup. Which other people those are, we don't yet know, but it may be you and Bertram. If that is the correct interpretation, then hold tight and they'll make further changes. Then we can see what they're up to.

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Cheers,

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Iain.


 

Thanks Iain,
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If I remember well, the first time that SNP Y340824 appeared in the Yfull tree was two or three years ago, with US testers from Nebula Genomics. I don't know if it's still the case but it seems to me that Yfull had a partnership with this laboratory and that the testers were automatically included in the tree, but only temporarily. You had to pay Yfull to stay in the tree permanently. So this could explain the appearance of the Y340824 haplogroup on the Yfull tree. On the other hand, I still don't understand why Shane and I are in a basal position of FGC17465 and not downstream of Y340824.
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Regarding the current new positive tester from Romania, I find his indicated place of origin interesting: it is the Judet of Alba in Transylvania, where Germanic settlers were installed by Hungary rulers during the 12th and 13th centuries, to defend the border of the kingdom against Tatar and Turkish incursions.
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Thanks and regards,
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Bertram
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Question?
How reliable is the tree in FTDNA?? I am tracing back and determined the tree to be helpful!

P. Turnbow?



On Wed, Nov 20, 2024 at 4:37?AM Bertram via <u106verdun=[email protected]> wrote:
Thanks Iain,
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If I remember well, the first time that SNP Y340824 appeared in the Yfull tree was two or three years ago, with US testers from Nebula Genomics. I don't know if it's still the case but it seems to me that Yfull had a partnership with this laboratory and that the testers were automatically included in the tree, but only temporarily. You had to pay Yfull to stay in the tree permanently. So this could explain the appearance of the Y340824 haplogroup on the Yfull tree. On the other hand, I still don't understand why Shane and I are in a basal position of FGC17465 and not downstream of Y340824.
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Regarding the current new positive tester from Romania, I find his indicated place of origin interesting: it is the Judet of Alba in Transylvania, where Germanic settlers were installed by Hungary rulers during the 12th and 13th centuries, to defend the border of the kingdom against Tatar and Turkish incursions.
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Thanks and regards,
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Bertram
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Edited

Bertram & Iain,
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Thanks Iain. I have been tracking the live sessions on Yfull over a few days. Currently the Romanian kit is now in another subclade BY127454. And Y340824 is now Y340824*. Maybe that's a good sign? It's been my observation that things get moved around a lot during a live session–often times to end up back where they started.
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Bertram, that's an interesting bit of history that I need to look into regarding the Judet of Alba in Transylvania!
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Shane


 

Thanks Shane,
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This Yfull subclade BY127454 has 6 of 7 SNPs found in FTDNA BY122236.
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We can now assume that Y340824 includes at least BY122236, BY11544 and your own line, Shane, among R-FGC17460 subclades.
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Bertram?


 

>How reliable is the tree in FTDNA?

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That depends on what you mean by "reliable". It is highly accurate, but incomplete. If you read point (1) on my recently posted message #8352, you'll see why.

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In short, any tree is only as good as the tests that make it up. FTDNA's tree is the most complete and is kept up-to-date, but it can only contain a portion of the whole story because we can only test a portion of the men who have ever lived. The tests themselves also only test a slightly different portion of each Y chromosome, so the tree does not represent all the mutations that exist, and a few individual mutations may not be in their exact positions if they are not covered in all of a haplogroup's tests.

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- Iain.


 

Iain,

I totally agree with your assessment, although I think the phrase "may not be in their exact positions" might be expanded.

When we were building the ISOGG tree in the past we would sometimes place markers on the tree "provisionally" if we didn't have enough samples to know exactly to which branch they belonged. ?FTDNA don't do this, AFAIK: each marker is in the "right position", so to speak.

The broader point you make about the incompleteness of the tree due to sampling is important, though, since every branch on the tree could possibly be split in the future due to either more broad testing or better testing technologies.

Vince
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On Thu, Nov 21, 2024 at 03:43 AM, Iain wrote:

In short, any tree is only as good as the tests that make it up. FTDNA's tree is the most complete and is kept up-to-date, but it can only contain a portion of the whole story because we can only test a portion of the men who have ever lived. The tests themselves also only test a slightly different portion of each Y chromosome, so the tree does not represent all the mutations that exist, and a few individual mutations may not be in their exact positions if they are not covered in all of a haplogroup's tests.


 

Lain,

Thanks.
P. Turnbow?




On Thu, Nov 21, 2024 at 6:43?AM Iain via <gubbins=[email protected]> wrote:

>How reliable is the tree in FTDNA?

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That depends on what you mean by "reliable". It is highly accurate, but incomplete. If you read point (1) on my recently posted message #8352, you'll see why.

?

In short, any tree is only as good as the tests that make it up. FTDNA's tree is the most complete and is kept up-to-date, but it can only contain a portion of the whole story because we can only test a portion of the men who have ever lived. The tests themselves also only test a slightly different portion of each Y chromosome, so the tree does not represent all the mutations that exist, and a few individual mutations may not be in their exact positions if they are not covered in all of a haplogroup's tests.

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- Iain.


 

Thanks Vince,

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To expand on "may not be in their exact positions":

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It can be that mutations are only recorded in some tests both not others. This could be because some tests are the old BigY-500 tests, while others are the current BigY-700 tests. Or sometimes it's because a SNP is only picked up in some BigY-700 tests and not others. To illustrate why this is a problem, consider the following imaginary haplogroups:

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R-X1
R-X1 > X2
R-X1 > X3
R-X1 > X3 > X4
R-X1 > X3 > X5

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A SNP is found in two individuals. One is in R-X4 and one is in R-X5. So we know that at least haplogroup R-X3 should be positive for the SNP. But if no-one in R-X2 has tested positive or negative for the SNP (and no-one who is in R-X1 but not in R-X2 or R-X3 has either) then we don't know if all R-X1 are positive or negative for the SNP or not, so we don't know whether the SNP should be placed as part of R-X1 or only as part of R-X3.

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Cheers,

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Iain.


 

Iain,
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I got an email from Bertram a few days ago in which he let me know that YFull confirms that Y340824 and BY122236 are the same. Also, FTDNA has some new developments regarding FGC17460+. I am now downstream from that haplogroup and belong to FTG78298–the MRCA for this is yet to be determined. Bertram is no longer in BY12236. FTDNA has yet to place me in that haplogroup despite my YFull result of Y340824+.
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Wanted to give an update.
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Shane
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Hi Shane,

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Thanks for the update. This is the first time I've seen FTG as a SNP prefix - they're certainly racing through them. I was looking at R-FGC17460 for unrelated purposes today and note you also have a second Danish tester, presumably someone who took a Family Finder test. Coupled with the Merovingian ancient DNA this makes for an interesting story - it will be nice to see it more clearly in time!

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Cheers,

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Iain.?


 

Hi Shane, Iain,
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Sorry, Shane, maybe I was not clear.
I don't think that Y340824 is the same SNP than BY122236, but now, on Yfull tree Y340824 is the name for BY122236 haplogroup in FTDNA tree.
And I noticed that all former basal R-FGC17460 testers like you, Shane, are now under a new haplogroup FTG78298, with only one SNP, together with all BY122236 testers.
However the FTDNA discover tree is not yet updated. I guess you are positive for Y340824, as you have at least this new SNP FTG78298 in common with BY122236.
On my side, as Y340824 is not tested by FTDNA, I did it with YSEQ and I am negative.
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BR
Bertram?