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Changes to YDNA Warehouse R-CTS4466 Tree


 

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Hi folks,

I’ve rewritten most of the tree viewer for YDNA Warehouse to make it load faster and include more information. ?It can actually render FTDNA’s full tree from A to the leaves in 5 seconds without the kits on my test machine… unfortunately they don’t allow for reuse of their information for non-private use though.

In the extract of R-A804 below, you can see the sample donor box has been reworked to separate the MDKA’s surname and year of birth when provided. ?The type of test with the most coverage available is noted in the upper right hand corner. ?If the sample has a blue background instead of gold, it’s a VCF/BED submission instead of BAM file. ?It’s the samples with the gold backgrounds that are the basis of the TMRCA calculations. ?Red background samples are Ancient DNA but not all of those have been marked correctly yet. ?Finally, the indigo background samples are for folks from 23&Me, AncestryDNA, etc...

The circled box which is referred to as the Taxa ID will become customizable in the near future. ?You will be able to select your FTDNA/FGC/YSEQ/etc kit for this purpose. ?I’m also considering allowing it to be used for other indicators like holders of verified royal titles. ?That would be a more manual process for verification purposes however.

The long standing “bug” when you hit enter after typing in the Search by Branch or SNP has been addressed and works to reload the tree based one the search instead of needing to use the Tab key.



As always if you would like to be included in this tree, your raw data needs to be uploaded. ?Should you need assistance reach out.

Thanks,

James Kane

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James, you never cease to amaze.

?

Thank you.

?

Elizabeth

?

From: [email protected] <[email protected]> On Behalf Of James Kane
Sent: 03 April 2024 02:02
To: [email protected]
Subject: [R1b-CTS4466-Plus] Changes to YDNA Warehouse R-CTS4466 Tree

?

Hi folks,

?

I’ve rewritten most of the tree viewer for YDNA Warehouse to make it load faster and include more information. ?It can actually render FTDNA’s full tree from A to the leaves in 5 seconds without the kits on my test machine… unfortunately they don’t allow for reuse of their information for non-private use though.

?

In the extract of R-A804 below, you can see the sample donor box has been reworked to separate the MDKA’s surname and year of birth when provided. ?The type of test with the most coverage available is noted in the upper right hand corner. ?If the sample has a blue background instead of gold, it’s a VCF/BED submission instead of BAM file. ?It’s the samples with the gold backgrounds that are the basis of the TMRCA calculations. ?Red background samples are Ancient DNA but not all of those have been marked correctly yet. ?Finally, the indigo background samples are for folks from 23&Me, AncestryDNA, etc...

?

The circled box which is referred to as the Taxa ID will become customizable in the near future. ?You will be able to select your FTDNA/FGC/YSEQ/etc kit for this purpose. ?I’m also considering allowing it to be used for other indicators like holders of verified royal titles. ?That would be a more manual process for verification purposes however.

?

The long standing “bug” when you hit enter after typing in the Search by Branch or SNP has been addressed and works to reload the tree based one the search instead of needing to use the Tab key.

?

?

?

As always if you would like to be included in this tree, your raw data needs to be uploaded. ?Should you need assistance reach out.

?

Thanks,

?

James Kane

?


Virus-free.


 

Thanks for this James.

John.?


On Wed 3 Apr 2024, 02:02 James Kane, <jkane@...> wrote:
Hi folks,

I’ve rewritten most of the tree viewer for YDNA Warehouse to make it load faster and include more information.? It can actually render FTDNA’s full tree from A to the leaves in 5 seconds without the kits on my test machine… unfortunately they don’t allow for reuse of their information for non-private use though.

In the extract of R-A804 below, you can see the sample donor box has been reworked to separate the MDKA’s surname and year of birth when provided.? The type of test with the most coverage available is noted in the upper right hand corner.? If the sample has a blue background instead of gold, it’s a VCF/BED submission instead of BAM file.? It’s the samples with the gold backgrounds that are the basis of the TMRCA calculations.? Red background samples are Ancient DNA but not all of those have been marked correctly yet.? Finally, the indigo background samples are for folks from 23&Me, AncestryDNA, etc...

The circled box which is referred to as the Taxa ID will become customizable in the near future.? You will be able to select your FTDNA/FGC/YSEQ/etc kit for this purpose.? I’m also considering allowing it to be used for other indicators like holders of verified royal titles.? That would be a more manual process for verification purposes however.

The long standing “bug” when you hit enter after typing in the Search by Branch or SNP has been addressed and works to reload the tree based one the search instead of needing to use the Tab key.



As always if you would like to be included in this tree, your raw data needs to be uploaded.? Should you need assistance reach out.

Thanks,

James Kane

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Thanks for the recognition and to follow up on the mentioned ability to change the kit# in the tree. ?This is now live.

If you want to show up as FTDNA - B5163 instead of the 8 character Tree Taxon ID, normal accounts can select it from the Custom name drop down. ?The selections on the preferences can be viewed in almost real-time until you save them. ?Only people with Site Administration role have access to the Admin Override shown below.

This screen is available from the Edit button. ?Should your kit be in the 80 or so that were left in my care to do the drudgery of managing, and want to switch to a different kit # let me know. ?

James Kane

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On Apr 3, 2024, at 3:28?AM, Elizabeth <elizabeth@...> wrote:

James, you never cease to amaze.
?
Thank you.
?
Elizabeth



 

good job it loads fast