I just tested multiple times on my QMX. RF sweep results were not impacted by whether the mode was CW or Digi.
QMX is an SDR radio. My understanding is that the hardware signal path for CW vs Digi has no difference - they both go through the same LPF, same BPF, same QSD, same OP Amps, and same ADC. After A/D conversion and I/Q decoding, different DSP filters are used for different modes, but RF sweeps shouldn't be impacted.
If the RF sweeps were done right after factory reset and you still saw different results between CW/Digi, I'd say it's probably not caused by a QMX software/firmware bug.?If you have an oscilloscope and signal generator, you can trace the signals at those RX stages (LPF, BPF, QSD, OP Amps) to see if there's any discrepancies between CW and Digi mode.
BTW, have you flashed it with the latest firmware version?
73 DE Zhenxing